Dynamic Protein Structure
MDA (Multi Domain Arrangement) is a software tool for arranging dynamic protein structures by FRET networks.
Please find the full paper here (please cite if MDA was useful to your work): Multidomain structure and correlated dynamics determined by self-consistent FRET networks
Please enter your email address to download the software tool and sample data (it will be used for update announcements only). By doing so you accept the MIT software license.
The software requires either Matlab or the free Matlab runtime version R2016b
Fig. 1: Follow the steps 1-5 for analyzing the structural ensemble and its fluctuations of a multi-domain protein.
Complete sample data for Hsp90’s open state is provided.
See 'Readme.pdf' for further specifications.